Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf8Q8VC56 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf8Q8VC56 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf8Q8VC56 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf8Q8VC56 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.45
Rnf8Q8VC56 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf8Q8VC56 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf8Q8VC56 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.83■□□□□ 0.44
Rnf8Q8VC56 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf8Q8VC56 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf8Q8VC56 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf8Q8VC56 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf8Q8VC56 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf8Q8VC56 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Gm10493-201ENSMUST00000097270 612 ntBASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf8Q8VC56 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf8Q8VC56 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Grk6-206ENSMUST00000224995 2971 ntBASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf8Q8VC56 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf8Q8VC56 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf8Q8VC56 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rnf8Q8VC56 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf8Q8VC56 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf8Q8VC56 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Rnf8Q8VC56 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms