Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Golph3-202ENSMUST00000226517 2359 ntBASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdh19Q80TF3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdh19Q80TF3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh19Q80TF3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh19Q80TF3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh19Q80TF3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh19Q80TF3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdh19Q80TF3 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.2■□□□□ 0.5
Pcdh19Q80TF3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh19Q80TF3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh19Q80TF3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Pcdh19Q80TF3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Trmt13-210ENSMUST00000198454 880 ntBASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh19Q80TF3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 Gm2559-201ENSMUST00000201323 363 ntBASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh19Q80TF3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Gm22240-201ENSMUST00000175225 82 ntBASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh19Q80TF3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Gm37856-201ENSMUST00000191634 999 ntBASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh19Q80TF3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdh19Q80TF3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.14■□□□□ 0.5
Pcdh19Q80TF3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms