Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CCDC30Q5VVM6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
CCDC30Q5VVM6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CCDC30Q5VVM6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.97■■□□□ 1.91
CCDC30Q5VVM6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.97■■□□□ 1.91
CCDC30Q5VVM6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
CCDC30Q5VVM6 AC231657.2-201ENST00000624556 255 ntBASIC26.97■■□□□ 1.91
CCDC30Q5VVM6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
CCDC30Q5VVM6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.97■■□□□ 1.91
CCDC30Q5VVM6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.96■■□□□ 1.91
CCDC30Q5VVM6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CCDC30Q5VVM6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
CCDC30Q5VVM6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
CCDC30Q5VVM6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CCDC30Q5VVM6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.95■■□□□ 1.9
CCDC30Q5VVM6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 TERF1P5-201ENST00000477545 1207 ntBASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CCDC30Q5VVM6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 CROCCP5-201ENST00000436658 830 ntBASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 CNN2P6-201ENST00000439038 900 ntBASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CCDC30Q5VVM6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 AC007322.1-201ENST00000426983 750 ntBASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CCDC30Q5VVM6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.91■■□□□ 1.9
CCDC30Q5VVM6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CCDC30Q5VVM6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC30Q5VVM6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
CCDC30Q5VVM6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
CCDC30Q5VVM6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.91■■□□□ 1.9
CCDC30Q5VVM6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC30Q5VVM6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.91■■□□□ 1.9
CCDC30Q5VVM6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.91■■□□□ 1.9
CCDC30Q5VVM6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.91■■□□□ 1.9
CCDC30Q5VVM6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms