Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.56■□□□□ 0.72
RFX4Q33E94 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.56■□□□□ 0.72
RFX4Q33E94 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.56■□□□□ 0.72
RFX4Q33E94 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFX4Q33E94 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX4Q33E94 AP005212.1-201ENST00000581547 1997 ntBASIC19.55■□□□□ 0.72
RFX4Q33E94 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX4Q33E94 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.55■□□□□ 0.72
RFX4Q33E94 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RFX4Q33E94 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RFX4Q33E94 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX4Q33E94 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.55■□□□□ 0.72
RFX4Q33E94 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.55■□□□□ 0.72
RFX4Q33E94 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX4Q33E94 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX4Q33E94 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX4Q33E94 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RFX4Q33E94 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.55■□□□□ 0.72
RFX4Q33E94 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX4Q33E94 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX4Q33E94 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.54■□□□□ 0.72
RFX4Q33E94 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX4Q33E94 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
RFX4Q33E94 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX4Q33E94 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.54■□□□□ 0.72
RFX4Q33E94 pRNA.6-201ENST00000610482 90 ntBASIC19.54■□□□□ 0.72
RFX4Q33E94 pRNA.5-201ENST00000612139 90 ntBASIC19.54■□□□□ 0.72
RFX4Q33E94 pRNA.11-201ENST00000618423 90 ntBASIC19.54■□□□□ 0.72
RFX4Q33E94 pRNA.13-201ENST00000619112 90 ntBASIC19.54■□□□□ 0.72
RFX4Q33E94 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX4Q33E94 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX4Q33E94 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFX4Q33E94 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX4Q33E94 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX4Q33E94 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.54■□□□□ 0.72
RFX4Q33E94 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFX4Q33E94 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFX4Q33E94 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RFX4Q33E94 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX4Q33E94 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.53■□□□□ 0.72
RFX4Q33E94 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RFX4Q33E94 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.53■□□□□ 0.72
RFX4Q33E94 KRT16P3-201ENST00000439127 1283 ntBASIC19.53■□□□□ 0.72
RFX4Q33E94 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.53■□□□□ 0.72
RFX4Q33E94 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFX4Q33E94 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX4Q33E94 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX4Q33E94 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.53■□□□□ 0.72
RFX4Q33E94 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX4Q33E94 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RFX4Q33E94 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFX4Q33E94 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFX4Q33E94 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFX4Q33E94 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.52■□□□□ 0.72
RFX4Q33E94 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFX4Q33E94 AC006455.2-201ENST00000429931 906 ntBASIC19.52■□□□□ 0.72
RFX4Q33E94 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.52■□□□□ 0.72
RFX4Q33E94 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RFX4Q33E94 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFX4Q33E94 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RFX4Q33E94 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RFX4Q33E94 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.52■□□□□ 0.71
RFX4Q33E94 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
RFX4Q33E94 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RFX4Q33E94 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RFX4Q33E94 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX4Q33E94 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RFX4Q33E94 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX4Q33E94 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX4Q33E94 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX4Q33E94 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.51■□□□□ 0.71
RFX4Q33E94 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.51■□□□□ 0.71
RFX4Q33E94 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.51■□□□□ 0.71
RFX4Q33E94 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.51■□□□□ 0.71
RFX4Q33E94 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFX4Q33E94 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RFX4Q33E94 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX4Q33E94 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
RFX4Q33E94 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.51■□□□□ 0.71
RFX4Q33E94 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX4Q33E94 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX4Q33E94 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX4Q33E94 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX4Q33E94 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX4Q33E94 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX4Q33E94 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX4Q33E94 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX4Q33E94 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
RFX4Q33E94 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX4Q33E94 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.5■□□□□ 0.71
RFX4Q33E94 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.5■□□□□ 0.71
RFX4Q33E94 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.5■□□□□ 0.71
RFX4Q33E94 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX4Q33E94 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX4Q33E94 AL356740.2-201ENST00000601559 647 ntBASIC19.5■□□□□ 0.71
RFX4Q33E94 AC099791.2-201ENST00000605725 427 ntBASIC19.5■□□□□ 0.71
RFX4Q33E94 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.5■□□□□ 0.71
RFX4Q33E94 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RFX4Q33E94 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX4Q33E94 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms