Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL1P22362 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL1P22362 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL1P22362 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL1P22362 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL1P22362 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCL1P22362 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL1P22362 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL1P22362 LINC01521-201ENST00000504184 1943 ntBASIC18.17■□□□□ 0.5
CCL1P22362 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL1P22362 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL1P22362 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.17■□□□□ 0.5
CCL1P22362 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL1P22362 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL1P22362 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.17■□□□□ 0.5
CCL1P22362 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.17■□□□□ 0.5
CCL1P22362 MIR572-201ENST00000384983 95 ntBASIC18.17■□□□□ 0.5
CCL1P22362 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.17■□□□□ 0.5
CCL1P22362 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.17■□□□□ 0.5
CCL1P22362 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCL1P22362 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCL1P22362 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL1P22362 RASA4CP-201ENST00000424092 1398 ntBASIC18.17■□□□□ 0.5
CCL1P22362 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL1P22362 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.17■□□□□ 0.5
CCL1P22362 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.16■□□□□ 0.5
CCL1P22362 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
CCL1P22362 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL1P22362 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCL1P22362 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL1P22362 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL1P22362 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL1P22362 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL1P22362 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCL1P22362 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.16■□□□□ 0.5
CCL1P22362 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.16■□□□□ 0.5
CCL1P22362 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.16■□□□□ 0.5
CCL1P22362 AL355001.2-201ENST00000620617 1191 ntBASIC18.16■□□□□ 0.5
CCL1P22362 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL1P22362 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.16■□□□□ 0.5
CCL1P22362 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL1P22362 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCL1P22362 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCL1P22362 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCL1P22362 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL1P22362 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL1P22362 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCL1P22362 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL1P22362 MIR939-201ENST00000401314 82 ntBASIC18.15■□□□□ 0.5
CCL1P22362 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.15■□□□□ 0.5
CCL1P22362 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.15■□□□□ 0.5
CCL1P22362 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.15■□□□□ 0.5
CCL1P22362 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCL1P22362 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL1P22362 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL1P22362 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.15■□□□□ 0.5
CCL1P22362 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL1P22362 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCL1P22362 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCL1P22362 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCL1P22362 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.14■□□□□ 0.5
CCL1P22362 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCL1P22362 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.14■□□□□ 0.5
CCL1P22362 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.14■□□□□ 0.5
CCL1P22362 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCL1P22362 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCL1P22362 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.14■□□□□ 0.49
CCL1P22362 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.14■□□□□ 0.49
CCL1P22362 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.14■□□□□ 0.49
CCL1P22362 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.14■□□□□ 0.49
CCL1P22362 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.14■□□□□ 0.49
CCL1P22362 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CCL1P22362 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 AC006128.1-201ENST00000624704 1661 ntBASIC18.14■□□□□ 0.49
CCL1P22362 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.14■□□□□ 0.49
CCL1P22362 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.14■□□□□ 0.49
CCL1P22362 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL1P22362 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCL1P22362 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCL1P22362 AL157384.1-201ENST00000445995 2473 ntBASIC18.13■□□□□ 0.49
CCL1P22362 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL1P22362 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.13■□□□□ 0.49
CCL1P22362 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCL1P22362 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.13■□□□□ 0.49
CCL1P22362 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCL1P22362 AC091305.1-201ENST00000479476 895 ntBASIC18.13■□□□□ 0.49
CCL1P22362 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms