Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.47■■□□□ 1.19
RB1P06400 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RB1P06400 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RB1P06400 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.47■■□□□ 1.19
RB1P06400 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.47■■□□□ 1.19
RB1P06400 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RB1P06400 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.47■■□□□ 1.19
RB1P06400 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.47■■□□□ 1.19
RB1P06400 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
RB1P06400 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.47■■□□□ 1.19
RB1P06400 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RB1P06400 AC061975.6-201ENST00000579045 1553 ntBASIC22.46■■□□□ 1.19
RB1P06400 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
RB1P06400 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RB1P06400 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RB1P06400 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RB1P06400 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RB1P06400 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.46■■□□□ 1.19
RB1P06400 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.46■■□□□ 1.19
RB1P06400 AC008403.3-201ENST00000598924 454 ntBASIC22.46■■□□□ 1.19
RB1P06400 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.46■■□□□ 1.19
RB1P06400 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RB1P06400 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.46■■□□□ 1.19
RB1P06400 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RB1P06400 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
RB1P06400 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
RB1P06400 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
RB1P06400 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
RB1P06400 AC137767.1-201ENST00000602918 1920 ntBASIC22.45■■□□□ 1.18
RB1P06400 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RB1P06400 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RB1P06400 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RB1P06400 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RB1P06400 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.45■■□□□ 1.18
RB1P06400 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.45■■□□□ 1.18
RB1P06400 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.45■■□□□ 1.18
RB1P06400 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RB1P06400 KRT17P1-201ENST00000399211 1546 ntBASIC22.45■■□□□ 1.18
RB1P06400 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.45■■□□□ 1.18
RB1P06400 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RB1P06400 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RB1P06400 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RB1P06400 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RB1P06400 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RB1P06400 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RB1P06400 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.44■■□□□ 1.18
RB1P06400 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RB1P06400 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RB1P06400 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.44■■□□□ 1.18
RB1P06400 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.44■■□□□ 1.18
RB1P06400 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.44■■□□□ 1.18
RB1P06400 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.44■■□□□ 1.18
RB1P06400 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
RB1P06400 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
RB1P06400 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RB1P06400 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.44■■□□□ 1.18
RB1P06400 CYP2T3P-201ENST00000601990 817 ntBASIC22.44■■□□□ 1.18
RB1P06400 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.44■■□□□ 1.18
RB1P06400 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RB1P06400 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.43■■□□□ 1.18
RB1P06400 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RB1P06400 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RB1P06400 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.43■■□□□ 1.18
RB1P06400 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RB1P06400 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RB1P06400 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
RB1P06400 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RB1P06400 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
RB1P06400 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RB1P06400 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RB1P06400 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RB1P06400 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RB1P06400 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RB1P06400 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RB1P06400 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.42■■□□□ 1.18
RB1P06400 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RB1P06400 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RB1P06400 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RB1P06400 AL355472.2-201ENST00000422958 438 ntBASIC22.42■■□□□ 1.18
RB1P06400 CDV3P1-201ENST00000471403 739 ntBASIC22.42■■□□□ 1.18
RB1P06400 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.42■■□□□ 1.18
RB1P06400 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.42■■□□□ 1.18
RB1P06400 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
RB1P06400 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RB1P06400 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RB1P06400 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RB1P06400 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RB1P06400 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RB1P06400 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.41■■□□□ 1.18
RB1P06400 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
RB1P06400 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.41■■□□□ 1.18
RB1P06400 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.41■■□□□ 1.18
RB1P06400 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RB1P06400 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.41■■□□□ 1.18
RB1P06400 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.41■■□□□ 1.18
RB1P06400 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RB1P06400 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RB1P06400 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RB1P06400 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
RB1P06400 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms