Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTCAO00442 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTCAO00442 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTCAO00442 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RTCAO00442 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RTCAO00442 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RTCAO00442 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RTCAO00442 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 TERF1P2-201ENST00000583350 1212 ntBASIC20.1■□□□□ 0.81
RTCAO00442 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 AL024507.2-201ENST00000606070 2574 ntBASIC20.1■□□□□ 0.81
RTCAO00442 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 FEM1AP4-201ENST00000443167 1987 ntBASIC20.1■□□□□ 0.81
RTCAO00442 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
RTCAO00442 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
RTCAO00442 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTCAO00442 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTCAO00442 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RTCAO00442 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.09■□□□□ 0.81
RTCAO00442 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
RTCAO00442 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTCAO00442 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTCAO00442 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTCAO00442 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTCAO00442 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.09■□□□□ 0.81
RTCAO00442 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTCAO00442 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTCAO00442 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTCAO00442 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTCAO00442 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.08■□□□□ 0.81
RTCAO00442 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.08■□□□□ 0.81
RTCAO00442 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTCAO00442 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTCAO00442 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.08■□□□□ 0.81
RTCAO00442 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTCAO00442 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.08■□□□□ 0.81
RTCAO00442 KRT18P14-201ENST00000534205 1250 ntBASIC20.08■□□□□ 0.81
RTCAO00442 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTCAO00442 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTCAO00442 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTCAO00442 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.08■□□□□ 0.8
RTCAO00442 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.08■□□□□ 0.8
RTCAO00442 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTCAO00442 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTCAO00442 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTCAO00442 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTCAO00442 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
RTCAO00442 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RTCAO00442 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTCAO00442 KRT87P-202ENST00000534226 1464 ntBASIC20.07■□□□□ 0.8
RTCAO00442 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.07■□□□□ 0.8
RTCAO00442 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.07■□□□□ 0.8
RTCAO00442 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTCAO00442 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RTCAO00442 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTCAO00442 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.07■□□□□ 0.8
RTCAO00442 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RTCAO00442 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.07■□□□□ 0.8
RTCAO00442 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTCAO00442 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTCAO00442 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTCAO00442 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RTCAO00442 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTCAO00442 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.06■□□□□ 0.8
RTCAO00442 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
RTCAO00442 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTCAO00442 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.06■□□□□ 0.8
RTCAO00442 EEF1DP3-203ENST00000566025 782 ntBASIC20.06■□□□□ 0.8
RTCAO00442 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.06■□□□□ 0.8
RTCAO00442 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
RTCAO00442 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
RTCAO00442 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTCAO00442 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTCAO00442 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.05■□□□□ 0.8
RTCAO00442 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.05■□□□□ 0.8
RTCAO00442 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RTCAO00442 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.05■□□□□ 0.8
RTCAO00442 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RTCAO00442 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTCAO00442 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.05■□□□□ 0.8
RTCAO00442 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.05■□□□□ 0.8
RTCAO00442 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.05■□□□□ 0.8
RTCAO00442 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTCAO00442 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTCAO00442 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTCAO00442 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.05■□□□□ 0.8
RTCAO00442 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.05■□□□□ 0.8
RTCAO00442 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTCAO00442 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTCAO00442 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTCAO00442 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTCAO00442 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RTCAO00442 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms