Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm11127A7VMS2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Gm11127A7VMS2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm11127A7VMS2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.38■□□□□ 0.21
Gm11127A7VMS2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Gm11127A7VMS2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm11127A7VMS2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm11127A7VMS2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Gm11127A7VMS2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11127A7VMS2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11127A7VMS2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Gm11127A7VMS2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Gm11127A7VMS2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11127A7VMS2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.33■□□□□ 0.2
Gm11127A7VMS2 Gm43137-201ENSMUST00000198052 594 ntBASIC16.33■□□□□ 0.2
Gm11127A7VMS2 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.33■□□□□ 0.2
Gm11127A7VMS2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11127A7VMS2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11127A7VMS2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11127A7VMS2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Gm11127A7VMS2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11127A7VMS2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms