Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13n-2A0A0G2JF93 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav13n-2A0A0G2JF93 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13n-2A0A0G2JF93 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.27□□□□□ -0.44
Trav13n-2A0A0G2JF93 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13n-2A0A0G2JF93 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13n-2A0A0G2JF93 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.27□□□□□ -0.44
Trav13n-2A0A0G2JF93 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13n-2A0A0G2JF93 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13n-2A0A0G2JF93 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav13n-2A0A0G2JF93 Cap2-205ENSMUST00000225824 1634 ntBASIC12.27□□□□□ -0.44
Trav13n-2A0A0G2JF93 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13n-2A0A0G2JF93 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav13n-2A0A0G2JF93 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms