Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 AC244015.2-201ENST00000616358 1861 ntBASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV4A0A0C4DH28 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 MIR572-201ENST00000384983 95 ntBASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV4A0A0C4DH28 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 AC009237.3-201ENST00000393279 1427 ntBASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 AC026471.6-201ENST00000622954 1905 ntBASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 AC005837.3-201ENST00000612163 286 ntBASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRGV4A0A0C4DH28 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 AP006587.3-201ENST00000525742 1516 ntBASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 SUDS3P1-201ENST00000505831 966 ntBASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 AL031432.3-201ENST00000607698 485 ntBASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRGV4A0A0C4DH28 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV4A0A0C4DH28 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
TRGV4A0A0C4DH28 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRGV4A0A0C4DH28 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 CLDN5-201ENST00000403084 2357 ntBASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.08■□□□□ 0
TRGV4A0A0C4DH28 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms