Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16d-dv11A0A075B617 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm10232-201ENSMUST00000089221 720 ntBASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16d-dv11A0A075B617 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm40881-201ENSMUST00000223397 166 ntBASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16d-dv11A0A075B617 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.6□□□□□ -0.23
Trav16d-dv11A0A075B617 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms