Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 TSPY26P-201ENST00000476365 1326 ntBASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 SMUG1P1-201ENST00000590640 811 ntBASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHA9Q9Y5H5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.33■□□□□ 0.84
PCDHA9Q9Y5H5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA9Q9Y5H5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA9Q9Y5H5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHA9Q9Y5H5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA9Q9Y5H5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA9Q9Y5H5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 AL034346.1-201ENST00000568244 1277 ntBASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 AC104564.3-201ENST00000582367 638 ntBASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA9Q9Y5H5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA9Q9Y5H5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 AP004607.7-201ENST00000527152 1677 ntBASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHA9Q9Y5H5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 AC142381.2-201ENST00000566120 298 ntBASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 AC005837.3-201ENST00000612163 286 ntBASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHA9Q9Y5H5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHA9Q9Y5H5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 656.5 ms