Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 AC026271.2-201ENST00000428091 497 ntBASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 AC104564.3-201ENST00000582367 638 ntBASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 AC105233.4-201ENST00000642045 216 ntBASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 AC244015.2-201ENST00000616358 1861 ntBASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A2Q9H9S3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SEC61A2Q9H9S3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SEC61A2Q9H9S3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A2Q9H9S3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.88■□□□□ 0.61
SEC61A2Q9H9S3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 SLC25A24-204ENST00000569674 2357 ntBASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A2Q9H9S3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A2Q9H9S3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.85■□□□□ 0.61
SEC61A2Q9H9S3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A2Q9H9S3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A2Q9H9S3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms