Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfwd3Q8CIK8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Gm7291-201ENSMUST00000199147 382 ntBASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfwd3Q8CIK8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfwd3Q8CIK8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfwd3Q8CIK8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfwd3Q8CIK8 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.39■□□□□ 0.38
Rfwd3Q8CIK8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd3Q8CIK8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms