Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.23■□□□□ 0.67
Trub1Q8C0D0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.23■□□□□ 0.67
Trub1Q8C0D0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trub1Q8C0D0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.23■□□□□ 0.67
Trub1Q8C0D0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trub1Q8C0D0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trub1Q8C0D0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trub1Q8C0D0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.22■□□□□ 0.67
Trub1Q8C0D0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.22■□□□□ 0.67
Trub1Q8C0D0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trub1Q8C0D0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trub1Q8C0D0 Gm5874-201ENSMUST00000096101 508 ntBASIC19.22■□□□□ 0.67
Trub1Q8C0D0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trub1Q8C0D0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trub1Q8C0D0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trub1Q8C0D0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trub1Q8C0D0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trub1Q8C0D0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trub1Q8C0D0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trub1Q8C0D0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trub1Q8C0D0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trub1Q8C0D0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trub1Q8C0D0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trub1Q8C0D0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Trub1Q8C0D0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trub1Q8C0D0 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Gm42642-201ENSMUST00000200683 355 ntBASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trub1Q8C0D0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Trub1Q8C0D0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trub1Q8C0D0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trub1Q8C0D0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trub1Q8C0D0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trub1Q8C0D0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trub1Q8C0D0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trub1Q8C0D0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trub1Q8C0D0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trub1Q8C0D0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trub1Q8C0D0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trub1Q8C0D0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trub1Q8C0D0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trub1Q8C0D0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trub1Q8C0D0 Gm18671-201ENSMUST00000214826 683 ntBASIC19.17■□□□□ 0.66
Trub1Q8C0D0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trub1Q8C0D0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trub1Q8C0D0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trub1Q8C0D0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trub1Q8C0D0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Trub1Q8C0D0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trub1Q8C0D0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.15■□□□□ 0.66
Trub1Q8C0D0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trub1Q8C0D0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Gm18284-201ENSMUST00000172604 624 ntBASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trub1Q8C0D0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Trub1Q8C0D0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms