Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip4Q8BQP8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip4Q8BQP8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip4Q8BQP8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rab11fip4Q8BQP8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.54■□□□□ 0.88
Rab11fip4Q8BQP8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip4Q8BQP8 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.54■□□□□ 0.88
Rab11fip4Q8BQP8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip4Q8BQP8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip4Q8BQP8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip4Q8BQP8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rab11fip4Q8BQP8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip4Q8BQP8 BC021767-201ENSMUST00000126387 1716 ntBASIC20.53■□□□□ 0.88
Rab11fip4Q8BQP8 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.53■□□□□ 0.88
Rab11fip4Q8BQP8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip4Q8BQP8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.53■□□□□ 0.88
Rab11fip4Q8BQP8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip4Q8BQP8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rab11fip4Q8BQP8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip4Q8BQP8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip4Q8BQP8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip4Q8BQP8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip4Q8BQP8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip4Q8BQP8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip4Q8BQP8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip4Q8BQP8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.52■□□□□ 0.88
Rab11fip4Q8BQP8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.52■□□□□ 0.88
Rab11fip4Q8BQP8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip4Q8BQP8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip4Q8BQP8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip4Q8BQP8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rab11fip4Q8BQP8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rab11fip4Q8BQP8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab11fip4Q8BQP8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Gm13146-201ENSMUST00000118508 780 ntBASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rab11fip4Q8BQP8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab11fip4Q8BQP8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab11fip4Q8BQP8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab11fip4Q8BQP8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 372.3 ms