Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim6Q8BGE7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim6Q8BGE7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim6Q8BGE7 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim6Q8BGE7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim6Q8BGE7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim6Q8BGE7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim6Q8BGE7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.68■□□□□ 0.74
Trim6Q8BGE7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Spcs1-204ENSMUST00000226782 949 ntBASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim6Q8BGE7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim6Q8BGE7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim6Q8BGE7 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.67■□□□□ 0.74
Trim6Q8BGE7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim6Q8BGE7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim6Q8BGE7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim6Q8BGE7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim6Q8BGE7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trim6Q8BGE7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim6Q8BGE7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim6Q8BGE7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim6Q8BGE7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim6Q8BGE7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim6Q8BGE7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim6Q8BGE7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.66■□□□□ 0.74
Trim6Q8BGE7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Trim6Q8BGE7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim6Q8BGE7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim6Q8BGE7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim6Q8BGE7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim6Q8BGE7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim6Q8BGE7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim6Q8BGE7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim6Q8BGE7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim6Q8BGE7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim6Q8BGE7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms