Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim50Q810I2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
Trim50Q810I2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim50Q810I2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim50Q810I2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim50Q810I2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim50Q810I2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim50Q810I2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim50Q810I2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.12■□□□□ 0.49
Trim50Q810I2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim50Q810I2 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.12■□□□□ 0.49
Trim50Q810I2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim50Q810I2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim50Q810I2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim50Q810I2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim50Q810I2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Trim50Q810I2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim50Q810I2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim50Q810I2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim50Q810I2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim50Q810I2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim50Q810I2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim50Q810I2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim50Q810I2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.11■□□□□ 0.49
Trim50Q810I2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.11■□□□□ 0.49
Trim50Q810I2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim50Q810I2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim50Q810I2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim50Q810I2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim50Q810I2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim50Q810I2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim50Q810I2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim50Q810I2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim50Q810I2 Gm26571-201ENSMUST00000181399 666 ntBASIC18.1■□□□□ 0.49
Trim50Q810I2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.1■□□□□ 0.49
Trim50Q810I2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim50Q810I2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim50Q810I2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim50Q810I2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim50Q810I2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim50Q810I2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim50Q810I2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim50Q810I2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim50Q810I2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim50Q810I2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Trim50Q810I2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim50Q810I2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim50Q810I2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trim50Q810I2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trim50Q810I2 AV356131-201ENSMUST00000206201 750 ntBASIC18.09■□□□□ 0.49
Trim50Q810I2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim50Q810I2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim50Q810I2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim50Q810I2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim50Q810I2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim50Q810I2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim50Q810I2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim50Q810I2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim50Q810I2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim50Q810I2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim50Q810I2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim50Q810I2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Trim50Q810I2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim50Q810I2 Gm10849-201ENSMUST00000100397 618 ntBASIC18.08■□□□□ 0.48
Trim50Q810I2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trim50Q810I2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim50Q810I2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim50Q810I2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.08■□□□□ 0.48
Trim50Q810I2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim50Q810I2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim50Q810I2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim50Q810I2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim50Q810I2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim50Q810I2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms