Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Gm27801-201ENSMUST00000184174 223 ntBASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Golph3-205ENSMUST00000228671 2842 ntBASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7d-3Q5R1I1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7d-3Q5R1I1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Gm43173-201ENSMUST00000202246 593 ntBASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav7d-3Q5R1I1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7d-3Q5R1I1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7d-3Q5R1I1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7d-3Q5R1I1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7d-3Q5R1I1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav7d-3Q5R1I1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7d-3Q5R1I1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7d-3Q5R1I1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7d-3Q5R1I1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7d-3Q5R1I1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7d-3Q5R1I1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms