Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cnga4Q3UW12 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnga4Q3UW12 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnga4Q3UW12 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.9■□□□□ 0.62
Cnga4Q3UW12 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnga4Q3UW12 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.9■□□□□ 0.62
Cnga4Q3UW12 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnga4Q3UW12 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnga4Q3UW12 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnga4Q3UW12 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cnga4Q3UW12 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cnga4Q3UW12 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cnga4Q3UW12 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cnga4Q3UW12 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Cnga4Q3UW12 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cnga4Q3UW12 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnga4Q3UW12 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cnga4Q3UW12 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cnga4Q3UW12 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cnga4Q3UW12 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.88■□□□□ 0.61
Cnga4Q3UW12 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Cnga4Q3UW12 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cnga4Q3UW12 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cnga4Q3UW12 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cnga4Q3UW12 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cnga4Q3UW12 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.87■□□□□ 0.61
Cnga4Q3UW12 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Cnga4Q3UW12 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.86■□□□□ 0.61
Cnga4Q3UW12 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Gm22238-201ENSMUST00000175222 88 ntBASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cnga4Q3UW12 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.85■□□□□ 0.61
Cnga4Q3UW12 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.85■□□□□ 0.61
Cnga4Q3UW12 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.85■□□□□ 0.61
Cnga4Q3UW12 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnga4Q3UW12 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnga4Q3UW12 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cnga4Q3UW12 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.85■□□□□ 0.61
Cnga4Q3UW12 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.85■□□□□ 0.61
Cnga4Q3UW12 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cnga4Q3UW12 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnga4Q3UW12 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.85■□□□□ 0.61
Cnga4Q3UW12 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnga4Q3UW12 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnga4Q3UW12 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnga4Q3UW12 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnga4Q3UW12 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnga4Q3UW12 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cnga4Q3UW12 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.83■□□□□ 0.6
Cnga4Q3UW12 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cnga4Q3UW12 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cnga4Q3UW12 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnga4Q3UW12 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms