Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
VcpQ01853 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
VcpQ01853 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VcpQ01853 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VcpQ01853 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VcpQ01853 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.79■□□□□ 0.76
VcpQ01853 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
VcpQ01853 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VcpQ01853 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VcpQ01853 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
VcpQ01853 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VcpQ01853 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
VcpQ01853 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VcpQ01853 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.78■□□□□ 0.76
VcpQ01853 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.78■□□□□ 0.76
VcpQ01853 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VcpQ01853 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VcpQ01853 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VcpQ01853 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VcpQ01853 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VcpQ01853 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VcpQ01853 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VcpQ01853 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VcpQ01853 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VcpQ01853 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VcpQ01853 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VcpQ01853 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VcpQ01853 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VcpQ01853 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.77■□□□□ 0.76
VcpQ01853 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VcpQ01853 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VcpQ01853 Gm6365-201ENSMUST00000054711 744 ntBASIC19.77■□□□□ 0.76
VcpQ01853 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.77■□□□□ 0.75
VcpQ01853 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
VcpQ01853 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
VcpQ01853 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VcpQ01853 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.76■□□□□ 0.75
VcpQ01853 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VcpQ01853 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VcpQ01853 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VcpQ01853 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VcpQ01853 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.76■□□□□ 0.75
VcpQ01853 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VcpQ01853 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VcpQ01853 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VcpQ01853 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.76■□□□□ 0.75
VcpQ01853 Trmt13-210ENSMUST00000198454 880 ntBASIC19.76■□□□□ 0.75
VcpQ01853 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.76■□□□□ 0.75
VcpQ01853 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.75■□□□□ 0.75
VcpQ01853 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
VcpQ01853 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VcpQ01853 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VcpQ01853 Gm7290-201ENSMUST00000104990 617 ntBASIC19.75■□□□□ 0.75
VcpQ01853 Gm12918-201ENSMUST00000120234 636 ntBASIC19.75■□□□□ 0.75
VcpQ01853 Gm15710-201ENSMUST00000121821 636 ntBASIC19.75■□□□□ 0.75
VcpQ01853 Gm38205-201ENSMUST00000192243 258 ntBASIC19.75■□□□□ 0.75
VcpQ01853 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.75■□□□□ 0.75
VcpQ01853 Gm5075-201ENSMUST00000196916 622 ntBASIC19.75■□□□□ 0.75
VcpQ01853 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VcpQ01853 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.75■□□□□ 0.75
VcpQ01853 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.75■□□□□ 0.75
VcpQ01853 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.75■□□□□ 0.75
VcpQ01853 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VcpQ01853 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VcpQ01853 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VcpQ01853 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VcpQ01853 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VcpQ01853 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VcpQ01853 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VcpQ01853 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
VcpQ01853 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcpQ01853 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcpQ01853 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcpQ01853 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VcpQ01853 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VcpQ01853 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcpQ01853 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcpQ01853 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcpQ01853 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VcpQ01853 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VcpQ01853 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VcpQ01853 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VcpQ01853 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.73■□□□□ 0.75
VcpQ01853 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
VcpQ01853 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.73■□□□□ 0.75
VcpQ01853 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.73■□□□□ 0.75
VcpQ01853 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VcpQ01853 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VcpQ01853 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms