Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
USP11P51784 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.99■■□□□ 1.43
USP11P51784 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP11P51784 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.99■■□□□ 1.43
USP11P51784 AC006015.1-201ENST00000429970 570 ntBASIC23.99■■□□□ 1.43
USP11P51784 AC137761.2-201ENST00000561729 223 ntBASIC23.99■■□□□ 1.43
USP11P51784 AC145350.3-201ENST00000569033 163 ntBASIC23.99■■□□□ 1.43
USP11P51784 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.99■■□□□ 1.43
USP11P51784 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.99■■□□□ 1.43
USP11P51784 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
USP11P51784 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.99■■□□□ 1.43
USP11P51784 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP11P51784 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP11P51784 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.98■■□□□ 1.43
USP11P51784 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP11P51784 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP11P51784 POU5F1P4-201ENST00000413175 1085 ntBASIC23.98■■□□□ 1.43
USP11P51784 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USP11P51784 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP11P51784 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.98■■□□□ 1.43
USP11P51784 AC008175.2-201ENST00000612840 297 ntBASIC23.98■■□□□ 1.43
USP11P51784 AC092666.2-201ENST00000613287 246 ntBASIC23.98■■□□□ 1.43
USP11P51784 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP11P51784 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP11P51784 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP11P51784 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USP11P51784 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USP11P51784 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
USP11P51784 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.97■■□□□ 1.43
USP11P51784 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
USP11P51784 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.97■■□□□ 1.43
USP11P51784 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
USP11P51784 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.97■■□□□ 1.43
USP11P51784 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
USP11P51784 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.97■■□□□ 1.43
USP11P51784 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
USP11P51784 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.96■■□□□ 1.43
USP11P51784 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
USP11P51784 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.96■■□□□ 1.43
USP11P51784 KRT18P11-201ENST00000435214 1283 ntBASIC23.96■■□□□ 1.43
USP11P51784 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.96■■□□□ 1.43
USP11P51784 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.96■■□□□ 1.43
USP11P51784 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.96■■□□□ 1.43
USP11P51784 AC092437.1-201ENST00000624794 1048 ntBASIC23.96■■□□□ 1.43
USP11P51784 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.96■■□□□ 1.43
USP11P51784 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
USP11P51784 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
USP11P51784 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
USP11P51784 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
USP11P51784 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
USP11P51784 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.95■■□□□ 1.43
USP11P51784 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
USP11P51784 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
USP11P51784 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
USP11P51784 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.95■■□□□ 1.42
USP11P51784 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
USP11P51784 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
USP11P51784 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
USP11P51784 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
USP11P51784 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.95■■□□□ 1.42
USP11P51784 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
USP11P51784 IKBKGP1-201ENST00000612193 1073 ntBASIC23.95■■□□□ 1.42
USP11P51784 AC244015.2-201ENST00000616358 1861 ntBASIC23.95■■□□□ 1.42
USP11P51784 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.95■■□□□ 1.42
USP11P51784 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
USP11P51784 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
USP11P51784 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP11P51784 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.94■■□□□ 1.42
USP11P51784 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
USP11P51784 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP11P51784 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP11P51784 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
USP11P51784 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP11P51784 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
USP11P51784 AC016769.1-201ENST00000409132 1010 ntBASIC23.94■■□□□ 1.42
USP11P51784 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP11P51784 SLC7A5P1-201ENST00000568957 537 ntBASIC23.94■■□□□ 1.42
USP11P51784 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
USP11P51784 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.93■■□□□ 1.42
USP11P51784 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.93■■□□□ 1.42
USP11P51784 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.93■■□□□ 1.42
USP11P51784 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.93■■□□□ 1.42
USP11P51784 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.93■■□□□ 1.42
USP11P51784 FBXW4P1-201ENST00000426721 2239 ntBASIC23.93■■□□□ 1.42
USP11P51784 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.93■■□□□ 1.42
USP11P51784 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 CLDN5-201ENST00000403084 2357 ntBASIC23.93■■□□□ 1.42
USP11P51784 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP11P51784 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
USP11P51784 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP11P51784 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms