Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MMP13P45452 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.95■■□□□ 1.1
MMP13P45452 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MMP13P45452 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP13P45452 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.94■■□□□ 1.1
MMP13P45452 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP13P45452 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP13P45452 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP13P45452 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP13P45452 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MMP13P45452 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.94■■□□□ 1.1
MMP13P45452 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP13P45452 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP13P45452 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP13P45452 AF106564.1-201ENST00000607058 2553 ntBASIC21.94■■□□□ 1.1
MMP13P45452 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MMP13P45452 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MMP13P45452 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MMP13P45452 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.93■■□□□ 1.1
MMP13P45452 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.93■■□□□ 1.1
MMP13P45452 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
MMP13P45452 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
MMP13P45452 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MMP13P45452 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.93■■□□□ 1.1
MMP13P45452 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.93■■□□□ 1.1
MMP13P45452 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.93■■□□□ 1.1
MMP13P45452 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MMP13P45452 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.93■■□□□ 1.1
MMP13P45452 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MMP13P45452 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MMP13P45452 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MMP13P45452 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.92■■□□□ 1.1
MMP13P45452 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MMP13P45452 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.92■■□□□ 1.1
MMP13P45452 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.92■■□□□ 1.1
MMP13P45452 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.92■■□□□ 1.1
MMP13P45452 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.92■■□□□ 1.1
MMP13P45452 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.92■■□□□ 1.1
MMP13P45452 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.92■■□□□ 1.1
MMP13P45452 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.92■■□□□ 1.1
MMP13P45452 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.92■■□□□ 1.1
MMP13P45452 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
MMP13P45452 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.92■■□□□ 1.1
MMP13P45452 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MMP13P45452 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MMP13P45452 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.91■■□□□ 1.1
MMP13P45452 AP004607.7-201ENST00000527152 1677 ntBASIC21.91■■□□□ 1.1
MMP13P45452 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.91■■□□□ 1.1
MMP13P45452 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.91■■□□□ 1.1
MMP13P45452 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.91■■□□□ 1.1
MMP13P45452 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MMP13P45452 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
MMP13P45452 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.91■■□□□ 1.1
MMP13P45452 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MMP13P45452 ZNRF2P3-201ENST00000424200 374 ntBASIC21.91■■□□□ 1.1
MMP13P45452 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.91■■□□□ 1.1
MMP13P45452 AC012414.1-201ENST00000556676 535 ntBASIC21.91■■□□□ 1.1
MMP13P45452 AL034346.1-201ENST00000568244 1277 ntBASIC21.91■■□□□ 1.1
MMP13P45452 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
MMP13P45452 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
MMP13P45452 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
MMP13P45452 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.91■■□□□ 1.1
MMP13P45452 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.91■■□□□ 1.1
MMP13P45452 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MMP13P45452 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.91■■□□□ 1.1
MMP13P45452 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP13P45452 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP13P45452 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP13P45452 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.9■■□□□ 1.1
MMP13P45452 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MMP13P45452 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP13P45452 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.9■■□□□ 1.1
MMP13P45452 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.9■■□□□ 1.1
MMP13P45452 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.9■■□□□ 1.1
MMP13P45452 AL354811.1-201ENST00000610286 706 ntBASIC21.9■■□□□ 1.1
MMP13P45452 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.9■■□□□ 1.1
MMP13P45452 AL358852.1-201ENST00000623174 1268 ntBASIC21.9■■□□□ 1.1
MMP13P45452 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP13P45452 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP13P45452 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.9■■□□□ 1.1
MMP13P45452 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP13P45452 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
MMP13P45452 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.9■■□□□ 1.1
MMP13P45452 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.9■■□□□ 1.1
MMP13P45452 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.9■■□□□ 1.1
MMP13P45452 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.9■■□□□ 1.1
MMP13P45452 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.9■■□□□ 1.1
MMP13P45452 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
MMP13P45452 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
MMP13P45452 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.1
MMP13P45452 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MMP13P45452 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MMP13P45452 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MMP13P45452 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
MMP13P45452 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.89■■□□□ 1.1
MMP13P45452 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP13P45452 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MMP13P45452 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP13P45452 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP13P45452 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms