Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTSDP07339 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSDP07339 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSDP07339 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CTSDP07339 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.54■□□□□ 0.4
CTSDP07339 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTSDP07339 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTSDP07339 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.54■□□□□ 0.4
CTSDP07339 AL034346.1-201ENST00000568244 1277 ntBASIC17.54■□□□□ 0.4
CTSDP07339 AC087239.1-201ENST00000622671 572 ntBASIC17.54■□□□□ 0.4
CTSDP07339 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTSDP07339 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSDP07339 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CTSDP07339 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSDP07339 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.53■□□□□ 0.4
CTSDP07339 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CTSDP07339 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.53■□□□□ 0.4
CTSDP07339 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSDP07339 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.53■□□□□ 0.4
CTSDP07339 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSDP07339 AC006128.1-201ENST00000624704 1661 ntBASIC17.53■□□□□ 0.4
CTSDP07339 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.53■□□□□ 0.4
CTSDP07339 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSDP07339 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
CTSDP07339 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSDP07339 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.52■□□□□ 0.4
CTSDP07339 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTSDP07339 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTSDP07339 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTSDP07339 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.52■□□□□ 0.4
CTSDP07339 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CTSDP07339 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTSDP07339 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.52■□□□□ 0.39
CTSDP07339 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.52■□□□□ 0.39
CTSDP07339 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.52■□□□□ 0.39
CTSDP07339 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTSDP07339 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSDP07339 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSDP07339 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSDP07339 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.51■□□□□ 0.39
CTSDP07339 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTSDP07339 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.51■□□□□ 0.39
CTSDP07339 KRT125P-201ENST00000546827 989 ntBASIC17.51■□□□□ 0.39
CTSDP07339 AL117332.1-201ENST00000622628 974 ntBASIC17.51■□□□□ 0.39
CTSDP07339 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSDP07339 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSDP07339 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSDP07339 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CTSDP07339 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CTSDP07339 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSDP07339 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTSDP07339 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSDP07339 AC003102.1-202ENST00000563394 1796 ntBASIC17.51■□□□□ 0.39
CTSDP07339 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTSDP07339 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 AC010997.5-201ENST00000609182 354 ntBASIC17.5■□□□□ 0.39
CTSDP07339 pRNA.6-201ENST00000610482 90 ntBASIC17.5■□□□□ 0.39
CTSDP07339 pRNA.5-201ENST00000612139 90 ntBASIC17.5■□□□□ 0.39
CTSDP07339 pRNA.11-201ENST00000618423 90 ntBASIC17.5■□□□□ 0.39
CTSDP07339 pRNA.13-201ENST00000619112 90 ntBASIC17.5■□□□□ 0.39
CTSDP07339 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSDP07339 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSDP07339 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CTSDP07339 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.5■□□□□ 0.39
CTSDP07339 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSDP07339 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSDP07339 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSDP07339 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSDP07339 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CTSDP07339 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSDP07339 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSDP07339 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSDP07339 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSDP07339 AC010141.3-201ENST00000456659 717 ntBASIC17.49■□□□□ 0.39
CTSDP07339 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CTSDP07339 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.49■□□□□ 0.39
CTSDP07339 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.49■□□□□ 0.39
CTSDP07339 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSDP07339 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSDP07339 AC073314.1-201ENST00000568729 2216 ntBASIC17.49■□□□□ 0.39
CTSDP07339 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CTSDP07339 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.49■□□□□ 0.39
CTSDP07339 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms