Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PdgfrbP05622 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.81■□□□□ 0.6
PdgfrbP05622 Gm15039-201ENSMUST00000118914 875 ntBASIC18.81■□□□□ 0.6
PdgfrbP05622 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
PdgfrbP05622 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.81■□□□□ 0.6
PdgfrbP05622 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.81■□□□□ 0.6
PdgfrbP05622 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.81■□□□□ 0.6
PdgfrbP05622 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PdgfrbP05622 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PdgfrbP05622 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.8■□□□□ 0.6
PdgfrbP05622 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.8■□□□□ 0.6
PdgfrbP05622 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PdgfrbP05622 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.79■□□□□ 0.6
PdgfrbP05622 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PdgfrbP05622 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PdgfrbP05622 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PdgfrbP05622 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PdgfrbP05622 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PdgfrbP05622 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.78■□□□□ 0.6
PdgfrbP05622 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PdgfrbP05622 Gm26571-201ENSMUST00000181399 666 ntBASIC18.78■□□□□ 0.6
PdgfrbP05622 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PdgfrbP05622 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PdgfrbP05622 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PdgfrbP05622 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PdgfrbP05622 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PdgfrbP05622 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PdgfrbP05622 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PdgfrbP05622 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PdgfrbP05622 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PdgfrbP05622 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.77■□□□□ 0.6
PdgfrbP05622 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PdgfrbP05622 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PdgfrbP05622 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PdgfrbP05622 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.77■□□□□ 0.6
PdgfrbP05622 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PdgfrbP05622 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
PdgfrbP05622 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PdgfrbP05622 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PdgfrbP05622 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PdgfrbP05622 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PdgfrbP05622 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PdgfrbP05622 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PdgfrbP05622 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PdgfrbP05622 AV356131-201ENSMUST00000206201 750 ntBASIC18.76■□□□□ 0.59
PdgfrbP05622 Gm7514-201ENSMUST00000209475 934 ntBASIC18.76■□□□□ 0.59
PdgfrbP05622 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PdgfrbP05622 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PdgfrbP05622 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PdgfrbP05622 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PdgfrbP05622 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PdgfrbP05622 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 Gm6420-201ENSMUST00000193885 723 ntBASIC18.75■□□□□ 0.59
PdgfrbP05622 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
PdgfrbP05622 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PdgfrbP05622 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PdgfrbP05622 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PdgfrbP05622 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PdgfrbP05622 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PdgfrbP05622 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms