Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.48■■□□□ 1.03
RIPK2O43353 PLK5-205ENST00000642079 1969 ntBASIC21.48■■□□□ 1.03
RIPK2O43353 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK2O43353 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RIPK2O43353 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK2O43353 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK2O43353 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RIPK2O43353 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.47■■□□□ 1.03
RIPK2O43353 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK2O43353 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RIPK2O43353 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK2O43353 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK2O43353 AC239859.2-201ENST00000444165 318 ntBASIC21.47■■□□□ 1.03
RIPK2O43353 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK2O43353 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK2O43353 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK2O43353 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK2O43353 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
RIPK2O43353 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
RIPK2O43353 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK2O43353 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RIPK2O43353 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.46■■□□□ 1.03
RIPK2O43353 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK2O43353 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK2O43353 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK2O43353 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.46■■□□□ 1.03
RIPK2O43353 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.46■■□□□ 1.03
RIPK2O43353 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.46■■□□□ 1.03
RIPK2O43353 AC099791.2-201ENST00000605725 427 ntBASIC21.46■■□□□ 1.03
RIPK2O43353 MIR6724-1-201ENST00000616420 92 ntBASIC21.46■■□□□ 1.03
RIPK2O43353 MIR6724-2-201ENST00000616483 92 ntBASIC21.46■■□□□ 1.03
RIPK2O43353 MIR6724-4-201ENST00000617390 92 ntBASIC21.46■■□□□ 1.03
RIPK2O43353 MIR6724-3-201ENST00000622482 92 ntBASIC21.46■■□□□ 1.03
RIPK2O43353 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK2O43353 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK2O43353 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK2O43353 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RIPK2O43353 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.46■■□□□ 1.03
RIPK2O43353 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK2O43353 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RIPK2O43353 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK2O43353 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK2O43353 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
RIPK2O43353 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.46■■□□□ 1.03
RIPK2O43353 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIPK2O43353 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIPK2O43353 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIPK2O43353 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIPK2O43353 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIPK2O43353 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIPK2O43353 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RIPK2O43353 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK2O43353 AP004607.7-201ENST00000527152 1677 ntBASIC21.45■■□□□ 1.02
RIPK2O43353 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK2O43353 MIR3181-201ENST00000578512 73 ntBASIC21.45■■□□□ 1.02
RIPK2O43353 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK2O43353 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.45■■□□□ 1.02
RIPK2O43353 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RIPK2O43353 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK2O43353 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.45■■□□□ 1.02
RIPK2O43353 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK2O43353 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK2O43353 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK2O43353 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.45■■□□□ 1.02
RIPK2O43353 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
RIPK2O43353 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK2O43353 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
RIPK2O43353 AC007952.6-201ENST00000573168 2673 ntBASIC21.44■■□□□ 1.02
RIPK2O43353 AC003957.1-201ENST00000625108 2673 ntBASIC21.44■■□□□ 1.02
RIPK2O43353 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK2O43353 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RIPK2O43353 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RIPK2O43353 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.44■■□□□ 1.02
RIPK2O43353 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RIPK2O43353 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK2O43353 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK2O43353 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
RIPK2O43353 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK2O43353 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK2O43353 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK2O43353 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.44■■□□□ 1.02
RIPK2O43353 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.44■■□□□ 1.02
RIPK2O43353 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.44■■□□□ 1.02
RIPK2O43353 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RIPK2O43353 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.43■■□□□ 1.02
RIPK2O43353 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK2O43353 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK2O43353 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.43■■□□□ 1.02
RIPK2O43353 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.43■■□□□ 1.02
RIPK2O43353 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK2O43353 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.43■■□□□ 1.02
RIPK2O43353 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK2O43353 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.43■■□□□ 1.02
RIPK2O43353 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK2O43353 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.43■■□□□ 1.02
RIPK2O43353 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK2O43353 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
RIPK2O43353 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK2O43353 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK2O43353 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms