Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Gm18671-201ENSMUST00000214826 683 ntBASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trav13d-3J3QMG8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13d-3J3QMG8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13d-3J3QMG8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13d-3J3QMG8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav13d-3J3QMG8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav13d-3J3QMG8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav13d-3J3QMG8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 AV356131-201ENSMUST00000206201 750 ntBASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Gm7514-201ENSMUST00000209475 934 ntBASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13d-3J3QMG8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 Gm26571-201ENSMUST00000181399 666 ntBASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 Gm6420-201ENSMUST00000193885 723 ntBASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13d-3J3QMG8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms