Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 AC010141.3-201ENST00000456659 717 ntBASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 KRT125P-201ENST00000546827 989 ntBASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 AL117332.1-201ENST00000622628 974 ntBASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUXBA0A1W2PPF3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUXBA0A1W2PPF3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 OR2I1P-207ENST00000453522 948 ntBASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 AC012354.3-201ENST00000623734 483 ntBASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 AC003102.1-202ENST00000563394 1796 ntBASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DUXBA0A1W2PPF3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUXBA0A1W2PPF3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
DUXBA0A1W2PPF3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.21■□□□□ 0.34
DUXBA0A1W2PPF3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 AC010997.5-201ENST00000609182 354 ntBASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 pRNA.6-201ENST00000610482 90 ntBASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 pRNA.5-201ENST00000612139 90 ntBASIC17.2■□□□□ 0.34
DUXBA0A1W2PPF3 pRNA.11-201ENST00000618423 90 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms