Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9d-4A0A0G2JG37 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9d-4A0A0G2JG37 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9d-4A0A0G2JG37 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9d-4A0A0G2JG37 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9d-4A0A0G2JG37 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9d-4A0A0G2JG37 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9d-4A0A0G2JG37 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9d-4A0A0G2JG37 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm42501-201ENSMUST00000200220 1026 ntBASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Gm9870-201ENSMUST00000063874 645 ntBASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9d-4A0A0G2JG37 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9d-4A0A0G2JG37 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms