Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Gm43173-201ENSMUST00000202246 593 ntBASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-1A0A075B699 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Gm7860-201ENSMUST00000121190 879 ntBASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Gm27454-201ENSMUST00000185090 204 ntBASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Grk6-206ENSMUST00000224995 2971 ntBASIC14.34□□□□□ -0.11
Trav9d-1A0A075B699 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9d-1A0A075B699 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.33□□□□□ -0.11
Trav9d-1A0A075B699 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav9d-1A0A075B699 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Gm40848-201ENSMUST00000221998 324 ntBASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav9d-1A0A075B699 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Gm12821-201ENSMUST00000120022 600 ntBASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Gm27801-201ENSMUST00000184174 223 ntBASIC14.31□□□□□ -0.12
Trav9d-1A0A075B699 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms