Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 GPX1P1-201ENST00000388829 606 ntBASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 AC104187.1-201ENST00000607510 612 ntBASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA3Q9Y5H0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 AL355802.2-201ENST00000402069 882 ntBASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHGA3Q9Y5H0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA3Q9Y5H0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA3Q9Y5H0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA3Q9Y5H0 AL121603.2-201ENST00000557373 2117 ntBASIC20.52■□□□□ 0.88
PCDHGA3Q9Y5H0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHGA3Q9Y5H0 AC231657.2-201ENST00000624556 255 ntBASIC20.52■□□□□ 0.88
PCDHGA3Q9Y5H0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA3Q9Y5H0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA3Q9Y5H0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA3Q9Y5H0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGA3Q9Y5H0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGA3Q9Y5H0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGA3Q9Y5H0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 AC092068.2-201ENST00000590491 1708 ntBASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PCDHGA3Q9Y5H0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
PCDHGA3Q9Y5H0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 DUX4L16-201ENST00000555130 1264 ntBASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 AC142086.2-201ENST00000569753 217 ntBASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.48■□□□□ 0.87
PCDHGA3Q9Y5H0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms