Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Htra1Q9R118 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Htra1Q9R118 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Htra1Q9R118 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Htra1Q9R118 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Htra1Q9R118 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Htra1Q9R118 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.23■□□□□ 0.35
Htra1Q9R118 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Htra1Q9R118 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Htra1Q9R118 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Htra1Q9R118 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Htra1Q9R118 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Htra1Q9R118 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Htra1Q9R118 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Htra1Q9R118 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Htra1Q9R118 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Htra1Q9R118 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Htra1Q9R118 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Htra1Q9R118 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Htra1Q9R118 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Htra1Q9R118 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Htra1Q9R118 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.21■□□□□ 0.35
Htra1Q9R118 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Htra1Q9R118 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Htra1Q9R118 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.2■□□□□ 0.34
Htra1Q9R118 Fst-202ENSMUST00000223640 2612 ntBASIC17.2■□□□□ 0.34
Htra1Q9R118 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Htra1Q9R118 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Htra1Q9R118 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Htra1Q9R118 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Htra1Q9R118 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Htra1Q9R118 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Htra1Q9R118 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Htra1Q9R118 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Htra1Q9R118 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Htra1Q9R118 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Htra1Q9R118 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Htra1Q9R118 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Htra1Q9R118 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.19■□□□□ 0.34
Htra1Q9R118 BC021767-201ENSMUST00000126387 1716 ntBASIC17.19■□□□□ 0.34
Htra1Q9R118 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.19■□□□□ 0.34
Htra1Q9R118 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Htra1Q9R118 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.19■□□□□ 0.34
Htra1Q9R118 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.19■□□□□ 0.34
Htra1Q9R118 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Htra1Q9R118 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Htra1Q9R118 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Htra1Q9R118 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Htra1Q9R118 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Htra1Q9R118 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Htra1Q9R118 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Htra1Q9R118 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.19■□□□□ 0.34
Htra1Q9R118 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.19■□□□□ 0.34
Htra1Q9R118 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.19■□□□□ 0.34
Htra1Q9R118 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.18■□□□□ 0.34
Htra1Q9R118 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.18■□□□□ 0.34
Htra1Q9R118 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Htra1Q9R118 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.18■□□□□ 0.34
Htra1Q9R118 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.18■□□□□ 0.34
Htra1Q9R118 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Htra1Q9R118 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.18■□□□□ 0.34
Htra1Q9R118 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.17■□□□□ 0.34
Htra1Q9R118 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Htra1Q9R118 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Htra1Q9R118 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Htra1Q9R118 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Htra1Q9R118 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Htra1Q9R118 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Htra1Q9R118 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Htra1Q9R118 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.17■□□□□ 0.34
Htra1Q9R118 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Htra1Q9R118 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Htra1Q9R118 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Htra1Q9R118 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Htra1Q9R118 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Htra1Q9R118 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Htra1Q9R118 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms