Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CYP39A1Q9NYL5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.18■■□□□ 1.46
CYP39A1Q9NYL5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.18■■□□□ 1.46
CYP39A1Q9NYL5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 CYP2T1P-201ENST00000432607 1285 ntBASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 AC120498.10-201ENST00000621827 505 ntBASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 C9orf163-202ENST00000624034 2573 ntBASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 AC092053.2-201ENST00000640557 1818 ntBASIC24.17■■□□□ 1.46
CYP39A1Q9NYL5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 AC080038.3-201ENST00000623346 1952 ntBASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 ABHD17AP1-201ENST00000358206 933 ntBASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CYP39A1Q9NYL5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP39A1Q9NYL5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CYP39A1Q9NYL5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CYP39A1Q9NYL5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
CYP39A1Q9NYL5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CYP39A1Q9NYL5 AC127496.7-201ENST00000625110 1798 ntBASIC24.14■■□□□ 1.46
CYP39A1Q9NYL5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
CYP39A1Q9NYL5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 CD99P1-205ENST00000527459 561 ntBASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CYP39A1Q9NYL5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 KRT16P2-201ENST00000414673 1423 ntBASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
CYP39A1Q9NYL5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 AC061975.6-201ENST00000579045 1553 ntBASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 AC069152.1-201ENST00000438030 544 ntBASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms