Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RNF146Q9NTX7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RNF146Q9NTX7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.26■■□□□ 1.47
RNF146Q9NTX7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
RNF146Q9NTX7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF146Q9NTX7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
RNF146Q9NTX7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF146Q9NTX7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 AC127496.7-201ENST00000625110 1798 ntBASIC24.25■■□□□ 1.47
RNF146Q9NTX7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF146Q9NTX7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.24■■□□□ 1.47
RNF146Q9NTX7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF146Q9NTX7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RNF146Q9NTX7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF146Q9NTX7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF146Q9NTX7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.24■■□□□ 1.47
RNF146Q9NTX7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.24■■□□□ 1.47
RNF146Q9NTX7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RNF146Q9NTX7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.24■■□□□ 1.47
RNF146Q9NTX7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RNF146Q9NTX7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 KRT16P2-201ENST00000414673 1423 ntBASIC24.23■■□□□ 1.47
RNF146Q9NTX7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 AC061975.6-201ENST00000579045 1553 ntBASIC24.23■■□□□ 1.47
RNF146Q9NTX7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF146Q9NTX7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF146Q9NTX7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
RNF146Q9NTX7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.22■■□□□ 1.47
RNF146Q9NTX7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.22■■□□□ 1.47
RNF146Q9NTX7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF146Q9NTX7 ABHD17AP1-201ENST00000358206 933 ntBASIC24.22■■□□□ 1.47
RNF146Q9NTX7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.22■■□□□ 1.47
RNF146Q9NTX7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.22■■□□□ 1.47
RNF146Q9NTX7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.22■■□□□ 1.47
RNF146Q9NTX7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RNF146Q9NTX7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 CD99P1-205ENST00000527459 561 ntBASIC24.21■■□□□ 1.47
RNF146Q9NTX7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 AC098934.4-201ENST00000564127 592 ntBASIC24.21■■□□□ 1.47
RNF146Q9NTX7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF146Q9NTX7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
RNF146Q9NTX7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF146Q9NTX7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF146Q9NTX7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF146Q9NTX7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF146Q9NTX7 AC069152.1-201ENST00000438030 544 ntBASIC24.2■■□□□ 1.46
RNF146Q9NTX7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF146Q9NTX7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.2■■□□□ 1.46
RNF146Q9NTX7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
RNF146Q9NTX7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
RNF146Q9NTX7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF146Q9NTX7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 RBM17P2-201ENST00000616397 1405 ntBASIC24.19■■□□□ 1.46
RNF146Q9NTX7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF146Q9NTX7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms