Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Gm43403-201ENSMUST00000198011 1786 ntBASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mrpl55Q9CZ83 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Gm43017-201ENSMUST00000198296 752 ntBASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mrpl55Q9CZ83 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mrpl55Q9CZ83 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mrpl55Q9CZ83 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms