Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim33Q99PP7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.43■□□□□ 0.54
Trim33Q99PP7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.43■□□□□ 0.54
Trim33Q99PP7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim33Q99PP7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim33Q99PP7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.41■□□□□ 0.54
Trim33Q99PP7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 AV356131-201ENSMUST00000206201 750 ntBASIC18.41■□□□□ 0.54
Trim33Q99PP7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim33Q99PP7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Gm10849-201ENSMUST00000100397 618 ntBASIC18.4■□□□□ 0.54
Trim33Q99PP7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim33Q99PP7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Trim33Q99PP7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim33Q99PP7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim33Q99PP7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.38■□□□□ 0.53
Trim33Q99PP7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim33Q99PP7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim33Q99PP7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim33Q99PP7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim33Q99PP7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.37■□□□□ 0.53
Trim33Q99PP7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.37■□□□□ 0.53
Trim33Q99PP7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim33Q99PP7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms