Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk9Q99J95 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk9Q99J95 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk9Q99J95 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk9Q99J95 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cdk9Q99J95 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk9Q99J95 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk9Q99J95 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cdk9Q99J95 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk9Q99J95 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cdk9Q99J95 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk9Q99J95 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk9Q99J95 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk9Q99J95 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk9Q99J95 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk9Q99J95 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk9Q99J95 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk9Q99J95 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk9Q99J95 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.76■□□□□ 0.59
Cdk9Q99J95 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.76■□□□□ 0.59
Cdk9Q99J95 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk9Q99J95 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk9Q99J95 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdk9Q99J95 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.75■□□□□ 0.59
Cdk9Q99J95 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdk9Q99J95 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk9Q99J95 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk9Q99J95 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Cdk9Q99J95 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk9Q99J95 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.73■□□□□ 0.59
Cdk9Q99J95 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk9Q99J95 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk9Q99J95 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Cdk9Q99J95 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.73■□□□□ 0.59
Cdk9Q99J95 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk9Q99J95 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk9Q99J95 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk9Q99J95 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk9Q99J95 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.72■□□□□ 0.59
Cdk9Q99J95 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.72■□□□□ 0.59
Cdk9Q99J95 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdk9Q99J95 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk9Q99J95 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk9Q99J95 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk9Q99J95 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk9Q99J95 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cdk9Q99J95 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.72■□□□□ 0.59
Cdk9Q99J95 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk9Q99J95 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk9Q99J95 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk9Q99J95 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk9Q99J95 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.71■□□□□ 0.59
Cdk9Q99J95 Gm9847-201ENSMUST00000052528 599 ntBASIC18.71■□□□□ 0.59
Cdk9Q99J95 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk9Q99J95 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Cdk9Q99J95 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk9Q99J95 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk9Q99J95 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cdk9Q99J95 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cdk9Q99J95 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk9Q99J95 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms