Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.46■□□□□ 0.39
S1PR3Q99500 AC027682.1-201ENST00000562846 899 ntBASIC17.46■□□□□ 0.39
S1PR3Q99500 AL031432.3-201ENST00000607698 485 ntBASIC17.46■□□□□ 0.39
S1PR3Q99500 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
S1PR3Q99500 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
S1PR3Q99500 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
S1PR3Q99500 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.45■□□□□ 0.38
S1PR3Q99500 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
S1PR3Q99500 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.45■□□□□ 0.38
S1PR3Q99500 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
S1PR3Q99500 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.45■□□□□ 0.38
S1PR3Q99500 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.45■□□□□ 0.38
S1PR3Q99500 MIR638-201ENST00000385237 100 ntBASIC17.45■□□□□ 0.38
S1PR3Q99500 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
S1PR3Q99500 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.45■□□□□ 0.38
S1PR3Q99500 AP001330.3-201ENST00000520123 633 ntBASIC17.45■□□□□ 0.38
S1PR3Q99500 AF213884.3-201ENST00000563833 479 ntBASIC17.45■□□□□ 0.38
S1PR3Q99500 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.45■□□□□ 0.38
S1PR3Q99500 AC005837.3-201ENST00000612163 286 ntBASIC17.45■□□□□ 0.38
S1PR3Q99500 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
S1PR3Q99500 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.45■□□□□ 0.38
S1PR3Q99500 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
S1PR3Q99500 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
S1PR3Q99500 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.45■□□□□ 0.38
S1PR3Q99500 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
S1PR3Q99500 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.45■□□□□ 0.38
S1PR3Q99500 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
S1PR3Q99500 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.44■□□□□ 0.38
S1PR3Q99500 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 MIR939-201ENST00000401314 82 ntBASIC17.44■□□□□ 0.38
S1PR3Q99500 AC099791.1-201ENST00000416440 715 ntBASIC17.44■□□□□ 0.38
S1PR3Q99500 AC142381.2-201ENST00000566120 298 ntBASIC17.44■□□□□ 0.38
S1PR3Q99500 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.44■□□□□ 0.38
S1PR3Q99500 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
S1PR3Q99500 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
S1PR3Q99500 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.44■□□□□ 0.38
S1PR3Q99500 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.43■□□□□ 0.38
S1PR3Q99500 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S1PR3Q99500 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
S1PR3Q99500 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S1PR3Q99500 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S1PR3Q99500 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
S1PR3Q99500 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
S1PR3Q99500 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.43■□□□□ 0.38
S1PR3Q99500 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
S1PR3Q99500 SUDS3P1-201ENST00000505831 966 ntBASIC17.43■□□□□ 0.38
S1PR3Q99500 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.43■□□□□ 0.38
S1PR3Q99500 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.43■□□□□ 0.38
S1PR3Q99500 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.43■□□□□ 0.38
S1PR3Q99500 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.43■□□□□ 0.38
S1PR3Q99500 AL136967.2-201ENST00000623968 743 ntBASIC17.43■□□□□ 0.38
S1PR3Q99500 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S1PR3Q99500 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
S1PR3Q99500 Z98882.1-201ENST00000622160 2253 ntBASIC17.43■□□□□ 0.38
S1PR3Q99500 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S1PR3Q99500 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S1PR3Q99500 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S1PR3Q99500 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
S1PR3Q99500 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.43■□□□□ 0.38
S1PR3Q99500 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.43■□□□□ 0.38
S1PR3Q99500 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.42■□□□□ 0.38
S1PR3Q99500 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S1PR3Q99500 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S1PR3Q99500 RASA4CP-201ENST00000424092 1398 ntBASIC17.42■□□□□ 0.38
S1PR3Q99500 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.42■□□□□ 0.38
S1PR3Q99500 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S1PR3Q99500 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
S1PR3Q99500 AC091305.1-201ENST00000479476 895 ntBASIC17.42■□□□□ 0.38
S1PR3Q99500 IGHV3-19-201ENST00000521488 291 ntBASIC17.42■□□□□ 0.38
S1PR3Q99500 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.42■□□□□ 0.38
S1PR3Q99500 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.42■□□□□ 0.38
S1PR3Q99500 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S1PR3Q99500 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
S1PR3Q99500 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
S1PR3Q99500 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
S1PR3Q99500 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
S1PR3Q99500 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S1PR3Q99500 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
S1PR3Q99500 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
S1PR3Q99500 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
S1PR3Q99500 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
S1PR3Q99500 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.41■□□□□ 0.38
S1PR3Q99500 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.41■□□□□ 0.38
S1PR3Q99500 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
S1PR3Q99500 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
S1PR3Q99500 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
S1PR3Q99500 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
S1PR3Q99500 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms