Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb21Q91V48 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb21Q91V48 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb21Q91V48 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb21Q91V48 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb21Q91V48 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb21Q91V48 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb21Q91V48 Gm27405-201ENSMUST00000184201 112 ntBASIC18.46■□□□□ 0.55
Pcdhb21Q91V48 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb21Q91V48 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb21Q91V48 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdhb21Q91V48 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb21Q91V48 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb21Q91V48 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb21Q91V48 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb21Q91V48 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb21Q91V48 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Gm26571-201ENSMUST00000181399 666 ntBASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb21Q91V48 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb21Q91V48 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.42■□□□□ 0.54
Pcdhb21Q91V48 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhb21Q91V48 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb21Q91V48 Golph3-205ENSMUST00000228671 2842 ntBASIC18.41■□□□□ 0.54
Pcdhb21Q91V48 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb21Q91V48 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhb21Q91V48 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb21Q91V48 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdhb21Q91V48 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb21Q91V48 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb21Q91V48 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb21Q91V48 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms