Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 AC005224.4-201ENST00000583262 1652 ntBASIC19.84■□□□□ 0.77
NUP43Q8NFH3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUP43Q8NFH3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 MIR638-201ENST00000385237 100 ntBASIC19.83■□□□□ 0.77
NUP43Q8NFH3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 AC012414.1-201ENST00000556676 535 ntBASIC19.83■□□□□ 0.77
NUP43Q8NFH3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.83■□□□□ 0.77
NUP43Q8NFH3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUP43Q8NFH3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUP43Q8NFH3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.83■□□□□ 0.76
NUP43Q8NFH3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
NUP43Q8NFH3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUP43Q8NFH3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUP43Q8NFH3 AC055733.4-201ENST00000638462 1354 ntBASIC19.83■□□□□ 0.76
NUP43Q8NFH3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.82■□□□□ 0.76
NUP43Q8NFH3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP43Q8NFH3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP43Q8NFH3 AL354811.1-201ENST00000610286 706 ntBASIC19.82■□□□□ 0.76
NUP43Q8NFH3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NUP43Q8NFH3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUP43Q8NFH3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUP43Q8NFH3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.82■□□□□ 0.76
NUP43Q8NFH3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUP43Q8NFH3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 AC105265.2-201ENST00000467189 838 ntBASIC19.81■□□□□ 0.76
NUP43Q8NFH3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUP43Q8NFH3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NUP43Q8NFH3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 IRS3P-201ENST00000223076 1006 ntBASIC19.79■□□□□ 0.76
NUP43Q8NFH3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 AL358852.1-201ENST00000623174 1268 ntBASIC19.79■□□□□ 0.76
NUP43Q8NFH3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 FEM1AP4-201ENST00000443167 1987 ntBASIC19.79■□□□□ 0.76
NUP43Q8NFH3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NUP43Q8NFH3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 AC005229.4-201ENST00000610085 2198 ntBASIC19.78■□□□□ 0.76
NUP43Q8NFH3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
NUP43Q8NFH3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms