Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RETREG2Q8NC44 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RETREG2Q8NC44 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RETREG2Q8NC44 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.04■■□□□ 1.44
RETREG2Q8NC44 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RETREG2Q8NC44 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RETREG2Q8NC44 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.03■■□□□ 1.44
RETREG2Q8NC44 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RETREG2Q8NC44 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RETREG2Q8NC44 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RETREG2Q8NC44 AC079089.2-201ENST00000531211 1277 ntBASIC24.02■■□□□ 1.44
RETREG2Q8NC44 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.02■■□□□ 1.44
RETREG2Q8NC44 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.02■■□□□ 1.44
RETREG2Q8NC44 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
RETREG2Q8NC44 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
RETREG2Q8NC44 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RETREG2Q8NC44 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RETREG2Q8NC44 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.01■■□□□ 1.43
RETREG2Q8NC44 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
RETREG2Q8NC44 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RETREG2Q8NC44 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RETREG2Q8NC44 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.01■■□□□ 1.43
RETREG2Q8NC44 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RETREG2Q8NC44 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24■■□□□ 1.43
RETREG2Q8NC44 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RETREG2Q8NC44 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24■■□□□ 1.43
RETREG2Q8NC44 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24■■□□□ 1.43
RETREG2Q8NC44 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
RETREG2Q8NC44 TMEM191A-211ENST00000637163 1067 ntBASIC24■■□□□ 1.43
RETREG2Q8NC44 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RETREG2Q8NC44 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24■■□□□ 1.43
RETREG2Q8NC44 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RETREG2Q8NC44 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RETREG2Q8NC44 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.99■■□□□ 1.43
RETREG2Q8NC44 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.99■■□□□ 1.43
RETREG2Q8NC44 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.99■■□□□ 1.43
RETREG2Q8NC44 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RETREG2Q8NC44 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
RETREG2Q8NC44 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RETREG2Q8NC44 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.99■■□□□ 1.43
RETREG2Q8NC44 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RETREG2Q8NC44 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RETREG2Q8NC44 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RETREG2Q8NC44 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RETREG2Q8NC44 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.98■■□□□ 1.43
RETREG2Q8NC44 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.98■■□□□ 1.43
RETREG2Q8NC44 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.98■■□□□ 1.43
RETREG2Q8NC44 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.98■■□□□ 1.43
RETREG2Q8NC44 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.98■■□□□ 1.43
RETREG2Q8NC44 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RETREG2Q8NC44 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.98■■□□□ 1.43
RETREG2Q8NC44 AC009237.3-201ENST00000393279 1427 ntBASIC23.98■■□□□ 1.43
RETREG2Q8NC44 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RETREG2Q8NC44 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 MFSD11-216ENST00000590393 1141 ntBASIC23.97■■□□□ 1.43
RETREG2Q8NC44 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 AL121832.2-201ENST00000610979 668 ntBASIC23.97■■□□□ 1.43
RETREG2Q8NC44 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RETREG2Q8NC44 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 CD99P1-205ENST00000527459 561 ntBASIC23.96■■□□□ 1.43
RETREG2Q8NC44 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.96■■□□□ 1.43
RETREG2Q8NC44 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.95■■□□□ 1.42
RETREG2Q8NC44 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms