Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casc4Q6P2L7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Casc4Q6P2L7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Casc4Q6P2L7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Casc4Q6P2L7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Casc4Q6P2L7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Casc4Q6P2L7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.85■□□□□ 0.61
Casc4Q6P2L7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Casc4Q6P2L7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Casc4Q6P2L7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Casc4Q6P2L7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Casc4Q6P2L7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Casc4Q6P2L7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.84■□□□□ 0.61
Casc4Q6P2L7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Casc4Q6P2L7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Casc4Q6P2L7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Casc4Q6P2L7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Casc4Q6P2L7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.83■□□□□ 0.61
Casc4Q6P2L7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Casc4Q6P2L7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casc4Q6P2L7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Casc4Q6P2L7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.82■□□□□ 0.6
Casc4Q6P2L7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.82■□□□□ 0.6
Casc4Q6P2L7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.82■□□□□ 0.6
Casc4Q6P2L7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casc4Q6P2L7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casc4Q6P2L7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Casc4Q6P2L7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casc4Q6P2L7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Casc4Q6P2L7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Gm27405-201ENSMUST00000184201 112 ntBASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Gm7291-201ENSMUST00000199147 382 ntBASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.81■□□□□ 0.6
Casc4Q6P2L7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.81■□□□□ 0.6
Casc4Q6P2L7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.81■□□□□ 0.6
Casc4Q6P2L7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casc4Q6P2L7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Casc4Q6P2L7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casc4Q6P2L7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
Casc4Q6P2L7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casc4Q6P2L7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casc4Q6P2L7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casc4Q6P2L7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.8■□□□□ 0.6
Casc4Q6P2L7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casc4Q6P2L7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Casc4Q6P2L7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms