Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 POU5F1P4-201ENST00000413175 1085 ntBASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 AL034346.1-201ENST00000568244 1277 ntBASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.11■■□□□ 1.13
PTCRAQ6ISU1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 KRT17P1-201ENST00000399211 1546 ntBASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PTCRAQ6ISU1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PTCRAQ6ISU1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PTCRAQ6ISU1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PTCRAQ6ISU1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PTCRAQ6ISU1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.08■■□□□ 1.13
PTCRAQ6ISU1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
PTCRAQ6ISU1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PTCRAQ6ISU1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.08■■□□□ 1.13
PTCRAQ6ISU1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.08■■□□□ 1.13
PTCRAQ6ISU1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.08■■□□□ 1.13
PTCRAQ6ISU1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.08■■□□□ 1.12
PTCRAQ6ISU1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PTCRAQ6ISU1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.08■■□□□ 1.12
PTCRAQ6ISU1 AP006587.3-201ENST00000525742 1516 ntBASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 AL355472.2-201ENST00000422958 438 ntBASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 AC233263.1-201ENST00000578059 224 ntBASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PTCRAQ6ISU1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 OR7E47P-201ENST00000546390 1422 ntBASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 PNMA6B-201ENST00000538162 1200 ntBASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 AC243732.1-201ENST00000612648 864 ntBASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 AC133561.5-201ENST00000635547 218 ntBASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 KRT16P2-201ENST00000414673 1423 ntBASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 KRT17P2-201ENST00000300992 1314 ntBASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.06■■□□□ 1.12
PTCRAQ6ISU1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.05■■□□□ 1.12
PTCRAQ6ISU1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
PTCRAQ6ISU1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCRAQ6ISU1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PTCRAQ6ISU1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCRAQ6ISU1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms