Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDKAL1Q5VV42 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CDKAL1Q5VV42 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.24■■□□□ 1.31
CDKAL1Q5VV42 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDKAL1Q5VV42 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.24■■□□□ 1.31
CDKAL1Q5VV42 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDKAL1Q5VV42 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CDKAL1Q5VV42 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDKAL1Q5VV42 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.24■■□□□ 1.31
CDKAL1Q5VV42 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDKAL1Q5VV42 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDKAL1Q5VV42 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDKAL1Q5VV42 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 BX842568.3-201ENST00000418104 571 ntBASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDKAL1Q5VV42 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 FEM1AP1-201ENST00000431297 1995 ntBASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDKAL1Q5VV42 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 MIR4767-201ENST00000582827 78 ntBASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 LINC01006-201ENST00000333319 2292 ntBASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDKAL1Q5VV42 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms