Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim72Q1XH17 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.94■□□□□ 0.78
Trim72Q1XH17 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim72Q1XH17 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.94■□□□□ 0.78
Trim72Q1XH17 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Trim72Q1XH17 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim72Q1XH17 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim72Q1XH17 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim72Q1XH17 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim72Q1XH17 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim72Q1XH17 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.93■□□□□ 0.78
Trim72Q1XH17 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.93■□□□□ 0.78
Trim72Q1XH17 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Trim72Q1XH17 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.92■□□□□ 0.78
Trim72Q1XH17 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim72Q1XH17 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim72Q1XH17 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim72Q1XH17 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Trim72Q1XH17 Gm8495-201ENSMUST00000188740 694 ntBASIC19.91■□□□□ 0.78
Trim72Q1XH17 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim72Q1XH17 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim72Q1XH17 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim72Q1XH17 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim72Q1XH17 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim72Q1XH17 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim72Q1XH17 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim72Q1XH17 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim72Q1XH17 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim72Q1XH17 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim72Q1XH17 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim72Q1XH17 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trim72Q1XH17 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim72Q1XH17 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim72Q1XH17 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim72Q1XH17 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.9■□□□□ 0.78
Trim72Q1XH17 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim72Q1XH17 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim72Q1XH17 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim72Q1XH17 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim72Q1XH17 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Trim72Q1XH17 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim72Q1XH17 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim72Q1XH17 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.89■□□□□ 0.77
Trim72Q1XH17 AV356131-201ENSMUST00000206201 750 ntBASIC19.89■□□□□ 0.77
Trim72Q1XH17 Gm7514-201ENSMUST00000209475 934 ntBASIC19.89■□□□□ 0.77
Trim72Q1XH17 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.89■□□□□ 0.77
Trim72Q1XH17 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim72Q1XH17 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim72Q1XH17 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim72Q1XH17 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim72Q1XH17 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim72Q1XH17 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim72Q1XH17 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim72Q1XH17 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms