Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 AC123595.1-201ENST00000440769 1046 ntBASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RASGEF1BQ0VAM2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 AC097381.1-201ENST00000429019 1296 ntBASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 AL034346.1-201ENST00000568244 1277 ntBASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RASGEF1BQ0VAM2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 MIR6821-201ENST00000617625 74 ntBASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 LINC02228-203ENST00000641970 1355 ntBASIC19.19■□□□□ 0.66
RASGEF1BQ0VAM2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 AC009237.3-201ENST00000393279 1427 ntBASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 AL137060.1-201ENST00000618151 2648 ntBASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 AC026271.2-201ENST00000428091 497 ntBASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RASGEF1BQ0VAM2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RASGEF1BQ0VAM2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 TPRG1LP1-201ENST00000598702 760 ntBASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.16■□□□□ 0.66
RASGEF1BQ0VAM2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms