Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 FYV5YCL058C 459 nt4.46□□□□□ -1.7
NPL3Q01560 RSC3YDR303C 2658 nt4.46□□□□□ -1.7
NPL3Q01560 RSC58YLR033W 1509 nt4.46□□□□□ -1.7
NPL3Q01560 CIT1YNR001C 1440 nt4.46□□□□□ -1.7
NPL3Q01560 YDL199CYDL199C 2064 nt4.45□□□□□ -1.7
NPL3Q01560 JJJ1YNL227C 1773 nt4.45□□□□□ -1.7
NPL3Q01560 ANR2YKL047W 1551 nt4.45□□□□□ -1.7
NPL3Q01560 PIR1YKL164C 1026 nt4.45□□□□□ -1.7
NPL3Q01560 RPL15BYMR121C 615 nt4.45□□□□□ -1.7
NPL3Q01560 FYV12YOR183W 390 nt4.45□□□□□ -1.7
NPL3Q01560 YBR103C-AYBR103C-A 144 nt4.45□□□□□ -1.7
NPL3Q01560 MSE1YOL033W 1611 nt4.45□□□□□ -1.7
NPL3Q01560 TAF5YBR198C 2397 nt4.45□□□□□ -1.7
NPL3Q01560 YML096WYML096W 1578 nt4.44□□□□□ -1.7
NPL3Q01560 OAF3YKR064W 2592 nt4.44□□□□□ -1.7
NPL3Q01560 TPO5YKL174C 1857 nt4.44□□□□□ -1.7
NPL3Q01560 ARG82YDR173C 1068 nt4.44□□□□□ -1.7
NPL3Q01560 YDR271CYDR271C 372 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)CtK(CUU)C 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)D1tK(CUU)D1 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)D2tK(CUU)D2 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)E1tK(CUU)E1 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)E2tK(CUU)E2 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)FtK(CUU)F 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)G1tK(CUU)G1 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)G2tK(CUU)G2 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)G3tK(CUU)G3 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)ItK(CUU)I 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)JtK(CUU)J 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)KtK(CUU)K 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)MtK(CUU)M 73 nt4.44□□□□□ -1.7
NPL3Q01560 tK(CUU)PtK(CUU)P 73 nt4.44□□□□□ -1.7
NPL3Q01560 GOS1YHL031C 672 nt4.44□□□□□ -1.7 RIP-Chip
NPL3Q01560 TIM10YHR005C-A 282 nt4.44□□□□□ -1.7 RIP-Chip
NPL3Q01560 LOH1YJL038C 660 nt4.44□□□□□ -1.7
NPL3Q01560 COA3YJL062W-A 258 nt4.44□□□□□ -1.7
NPL3Q01560 FYV7YLR068W 456 nt4.44□□□□□ -1.7
NPL3Q01560 YOR203WYOR203W 354 nt4.44□□□□□ -1.7
NPL3Q01560 ECM23YPL021W 564 nt4.44□□□□□ -1.7
NPL3Q01560 VBA2YBR293W 1425 nt4.44□□□□□ -1.7
NPL3Q01560 UTP25YIL091C 2166 nt4.44□□□□□ -1.7
NPL3Q01560 AKL1YBR059C 3327 nt4.44□□□□□ -1.7
NPL3Q01560 DBP3YGL078C 1572 nt4.44□□□□□ -1.7
NPL3Q01560 CHK1YBR274W 1584 nt4.44□□□□□ -1.7
NPL3Q01560 YNL284C-AYNL284C-A 1323 nt4.44□□□□□ -1.7
NPL3Q01560 DAP2YHR028C 2457 nt4.44□□□□□ -1.7
NPL3Q01560 TRM44YPL030W 1704 nt4.43□□□□□ -1.7
NPL3Q01560 YFR010W-AYFR010W-A 189 nt4.43□□□□□ -1.7
NPL3Q01560 MRM2YGL136C 963 nt4.43□□□□□ -1.7 RIP-Chip
NPL3Q01560 tS(AGA)D3tS(AGA)D3 83 nt4.43□□□□□ -1.7
NPL3Q01560 EAF6YJR082C 342 nt4.43□□□□□ -1.7 RIP-Chip
NPL3Q01560 UBI4YLL039C 1146 nt4.43□□□□□ -1.7
NPL3Q01560 YNL109WYNL109W 546 nt4.43□□□□□ -1.7
NPL3Q01560 YNL276CYNL276C 396 nt4.43□□□□□ -1.7
NPL3Q01560 YPR170CYPR170C 336 nt4.43□□□□□ -1.7
NPL3Q01560 PHO88YBR106W 567 nt4.43□□□□□ -1.7 RIP-Chip
NPL3Q01560 SUS1YBR111W-A 291 nt4.43□□□□□ -1.7 RIP-Chip
NPL3Q01560 YGR117CYGR117C 1431 nt4.43□□□□□ -1.7
NPL3Q01560 GAD1YMR250W 1758 nt4.42□□□□□ -1.7
NPL3Q01560 STE24YJR117W 1362 nt4.42□□□□□ -1.7
NPL3Q01560 KAP114YGL241W 3015 nt4.42□□□□□ -1.7
NPL3Q01560 PDR5YOR153W 4536 nt4.42□□□□□ -1.7
NPL3Q01560 YDL163WYDL163W 303 nt4.42□□□□□ -1.7
NPL3Q01560 HNT2YDR305C 654 nt4.42□□□□□ -1.7
NPL3Q01560 VPS74YDR372C 1038 nt4.42□□□□□ -1.7
NPL3Q01560 TAM41YGR046W 1158 nt4.42□□□□□ -1.7
NPL3Q01560 YIL115W-AYIL115W-A 372 nt4.42□□□□□ -1.7
NPL3Q01560 RNA14YMR061W 2034 nt4.42□□□□□ -1.7
NPL3Q01560 POP3YNL282W 588 nt4.42□□□□□ -1.7 RIP-Chip
NPL3Q01560 YOR199WYOR199W 330 nt4.42□□□□□ -1.7
NPL3Q01560 GDS1YOR355W 1569 nt4.42□□□□□ -1.7
NPL3Q01560 APD1YBR151W 951 nt4.42□□□□□ -1.7
NPL3Q01560 OM14YBR230C 405 nt4.42□□□□□ -1.7 RIP-Chip
NPL3Q01560 TIF4632YGL049C 2745 nt4.42□□□□□ -1.7
NPL3Q01560 TRM11YOL124C 1302 nt4.42□□□□□ -1.7
NPL3Q01560 YOL019WYOL019W 1656 nt4.41□□□□□ -1.7
NPL3Q01560 NTA1YJR062C 1374 nt4.41□□□□□ -1.7
NPL3Q01560 FUS2YMR232W 2034 nt4.41□□□□□ -1.7
NPL3Q01560 RPA14YDR156W 414 nt4.41□□□□□ -1.7 RIP-Chip
NPL3Q01560 MFA1YDR461W 111 nt4.41□□□□□ -1.7 RIP-Chip
NPL3Q01560 YEL030C-AYEL030C-A 315 nt4.41□□□□□ -1.7
NPL3Q01560 YAP5YIR018W 738 nt4.41□□□□□ -1.7 RIP-Chip
NPL3Q01560 YNL235CYNL235C 432 nt4.41□□□□□ -1.7
NPL3Q01560 YOR029WYOR029W 336 nt4.41□□□□□ -1.7
NPL3Q01560 REI1YBR267W 1182 nt4.41□□□□□ -1.7
NPL3Q01560 SSH4YKL124W 1740 nt4.41□□□□□ -1.7
NPL3Q01560 BOP2YLR267W 1713 nt4.41□□□□□ -1.7
NPL3Q01560 MDM30YLR368W 1797 nt4.4□□□□□ -1.7
NPL3Q01560 YDR114CYDR114C 303 nt4.4□□□□□ -1.71
NPL3Q01560 YDR320W-BYDR320W-B 138 nt4.4□□□□□ -1.71
NPL3Q01560 YIL029CYIL029C 429 nt4.4□□□□□ -1.71
NPL3Q01560 YIL068W-AYIL068W-A 384 nt4.4□□□□□ -1.71
NPL3Q01560 YKL070WYKL070W 510 nt4.4□□□□□ -1.71
NPL3Q01560 YBL010CYBL010C 843 nt4.4□□□□□ -1.71
NPL3Q01560 MRPL3YMR024W 1173 nt4.4□□□□□ -1.71
NPL3Q01560 RBL2YOR265W 321 nt4.4□□□□□ -1.71 RIP-Chip
NPL3Q01560 CTT1YGR088W 1689 nt4.4□□□□□ -1.71
NPL3Q01560 YOR192C-AYOR192C-A 1317 nt4.4□□□□□ -1.71
NPL3Q01560 YOR343W-AYOR343W-A 1317 nt4.4□□□□□ -1.71
NPL3Q01560 PHO84YML123C 1764 nt4.4□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms