Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH12P55289 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH12P55289 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH12P55289 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH12P55289 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDH12P55289 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH12P55289 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH12P55289 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDH12P55289 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDH12P55289 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH12P55289 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH12P55289 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH12P55289 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH12P55289 AC087239.1-201ENST00000622671 572 ntBASIC19.7■□□□□ 0.74
CDH12P55289 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH12P55289 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH12P55289 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDH12P55289 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH12P55289 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH12P55289 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH12P55289 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
CDH12P55289 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH12P55289 AC136469.2-201ENST00000623944 1028 ntBASIC19.69■□□□□ 0.74
CDH12P55289 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH12P55289 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH12P55289 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH12P55289 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDH12P55289 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CDH12P55289 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH12P55289 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH12P55289 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH12P55289 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDH12P55289 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH12P55289 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH12P55289 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH12P55289 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH12P55289 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH12P55289 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH12P55289 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH12P55289 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH12P55289 AC010141.3-201ENST00000456659 717 ntBASIC19.68■□□□□ 0.74
CDH12P55289 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.68■□□□□ 0.74
CDH12P55289 AC011298.3-201ENST00000615796 283 ntBASIC19.68■□□□□ 0.74
CDH12P55289 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH12P55289 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH12P55289 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH12P55289 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.68■□□□□ 0.74
CDH12P55289 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH12P55289 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH12P55289 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDH12P55289 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH12P55289 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CDH12P55289 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH12P55289 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
CDH12P55289 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH12P55289 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CDH12P55289 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CDH12P55289 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH12P55289 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH12P55289 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH12P55289 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH12P55289 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH12P55289 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH12P55289 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CDH12P55289 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CDH12P55289 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH12P55289 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH12P55289 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDH12P55289 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH12P55289 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH12P55289 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDH12P55289 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH12P55289 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDH12P55289 SLC47A1P1-202ENST00000449666 945 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms