Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccl6P27784 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
Ccl6P27784 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccl6P27784 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccl6P27784 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccl6P27784 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccl6P27784 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccl6P27784 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Ccl6P27784 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ccl6P27784 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl6P27784 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl6P27784 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.53□□□□□ -0.08
Ccl6P27784 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ccl6P27784 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccl6P27784 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccl6P27784 Gm38205-201ENSMUST00000192243 258 ntBASIC14.53□□□□□ -0.08
Ccl6P27784 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl6P27784 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl6P27784 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl6P27784 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl6P27784 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl6P27784 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccl6P27784 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl6P27784 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.52□□□□□ -0.08
Ccl6P27784 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Ccl6P27784 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl6P27784 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.52□□□□□ -0.08
Ccl6P27784 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl6P27784 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl6P27784 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl6P27784 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccl6P27784 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccl6P27784 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl6P27784 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccl6P27784 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.51□□□□□ -0.09
Ccl6P27784 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ccl6P27784 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccl6P27784 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl6P27784 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccl6P27784 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ccl6P27784 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.5□□□□□ -0.09
Ccl6P27784 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.5□□□□□ -0.09
Ccl6P27784 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.5□□□□□ -0.09
Ccl6P27784 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl6P27784 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms