Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa9P09631 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hoxa9P09631 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa9P09631 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa9P09631 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa9P09631 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Hoxa9P09631 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa9P09631 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa9P09631 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa9P09631 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa9P09631 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa9P09631 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa9P09631 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hoxa9P09631 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa9P09631 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.79■□□□□ 0.6
Hoxa9P09631 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Hoxa9P09631 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa9P09631 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hoxa9P09631 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa9P09631 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa9P09631 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa9P09631 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa9P09631 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxa9P09631 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Hoxa9P09631 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa9P09631 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hoxa9P09631 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa9P09631 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa9P09631 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.78■□□□□ 0.6
Hoxa9P09631 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hoxa9P09631 Gm27275-201ENSMUST00000184318 272 ntBASIC18.78■□□□□ 0.6
Hoxa9P09631 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.78■□□□□ 0.6
Hoxa9P09631 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa9P09631 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.78■□□□□ 0.6
Hoxa9P09631 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa9P09631 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa9P09631 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxa9P09631 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa9P09631 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Hoxa9P09631 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa9P09631 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa9P09631 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hoxa9P09631 Dio3-201ENSMUST00000097228 1449 ntBASIC18.77■□□□□ 0.6
Hoxa9P09631 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa9P09631 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa9P09631 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxa9P09631 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.77■□□□□ 0.6
Hoxa9P09631 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Hoxa9P09631 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.77■□□□□ 0.59
Hoxa9P09631 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxa9P09631 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa9P09631 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa9P09631 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hoxa9P09631 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa9P09631 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa9P09631 Gm44549-201ENSMUST00000208351 577 ntBASIC18.76■□□□□ 0.59
Hoxa9P09631 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa9P09631 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.76■□□□□ 0.59
Hoxa9P09631 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa9P09631 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa9P09631 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxa9P09631 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hoxa9P09631 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxa9P09631 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxa9P09631 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxa9P09631 Gm5643-201ENSMUST00000117081 966 ntBASIC18.75■□□□□ 0.59
Hoxa9P09631 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.75■□□□□ 0.59
Hoxa9P09631 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxa9P09631 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxa9P09631 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hoxa9P09631 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxa9P09631 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxa9P09631 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxa9P09631 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxa9P09631 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Hoxa9P09631 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxa9P09631 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxa9P09631 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxa9P09631 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.73■□□□□ 0.59
Hoxa9P09631 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxa9P09631 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.73■□□□□ 0.59
Hoxa9P09631 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.73■□□□□ 0.59
Hoxa9P09631 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.73■□□□□ 0.59
Hoxa9P09631 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxa9P09631 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxa9P09631 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hoxa9P09631 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxa9P09631 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa9P09631 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa9P09631 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa9P09631 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hoxa9P09631 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.72■□□□□ 0.59
Hoxa9P09631 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.72■□□□□ 0.59
Hoxa9P09631 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.72■□□□□ 0.59
Hoxa9P09631 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxa9P09631 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Hoxa9P09631 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms